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Publications

Selected 2014 publications

 

Author: Amanda M. Bettasso, Atul K. Singh, Euiwon Bae, Bartek Rajwa, Murat M. Dundar, J. Paul Robinson, E. Daniel Hirleman, and Arun K. Bhunia;

Title: Laser Optical Sensor, a Label-Free on-Plate Salmonella enterica Serovar Colony-Identification Tool;

Publication: mBio, 5:1-14, 2014 http://dx.doi.org/10.1016/j.jprot.2013.04.014

 

Selected 2013 publications

Author: Ran An, Dan Merrill, Larisa Avramova, Jennifer Sturgis, Maria Tsiper, J Paul Robinson, John Turek, David D Nolte;

Title: Phenotypic Profiling of Raf Inhibitors and Mitochondrial Toxicity in 3D Tissue Using Biodynamic Imaging

Publication: Journal of Biomolecular Screening 12/2013; first published on December 20, 2013 DOI:10.1177/1087057113516674

 

Author: David B. Jaroch , Jing Lu , Rajtarun Madangopal , Natalie D. Stull , Matthew Stensberg , Jin Shi , Jennifer L. Kahn, Ruth Herrera-Perez , Michael Zeitchek , Jennifer Sturgis , J. Paul Robinson , Mervin C. Yoder , D. Marshall Porterfield , Raghavendra G. Mirmira , Jenna L. Rickus;
Title: Mouse and human islets survive and function after coating by biosilicification;

Publication: American Journal of Physiology - Endocrinology and MetabolismPublished 15 November 2013Vol. 305no. E1230-E1240 DOI: 10.1152/ajpendo.00081.2013

 

Author: Yiqing Lu1, Jiangbo Zhao1, Run Zhang1,3, Yujia Liu1,4,6, Deming Liu1, Ewa M. Goldys1, Xusan Yang4, Peng Xi4, Anwar Sunna3, Jie Lu1,3, Yu Shi1,3, Robert C. Leif5, Yujing Huo7, Jian Shen8,  James A. Piper1, J. Paul Robinson2 and Dayong Jin1, 2, 3 *

Title: 'Tunable lifetime multiplexing using luminescent nanocrystals'

Publication: Nature Photonics ONLINE 15 December 2013 at 1800 London time / 1300 US Eastern time;  DOI: 10.1038/nphoton.2013.322

Author: Wamiq M. Ahmed, Bulent Bayraktar, Arun K. Bhunia, E. Dan Hirleman, J. Paul Robinson, and Bartek Rajwa,

Title: “Classification of Bacterial Contamination Using Image Processing and Distributed Computing

Publication: TITB-00035-2012.R2- IEEE Journal of Biomedical and Health Informatics,17:232-239, 2013 PMID:23060342

 

Author: J. Paul Robinson, Valery Patsekin, Cheryl Holdman, Kathy Ragheb, Jennifer Sturgis, Ray Fatig, Larisa V. Avramova,  Bartek Rajwa, V. Jo Davisson, Nicole Lewis, Padma Narayanan, Nianyu Li, C.J. Qualls 

Title: High-throughput secondary screening at the single-cell level;

Publication: Journal of Laboratory Automation, 18:85-98, 2013 JALA, DOI:10.1177/22110682/2456978

 

 

Selected 2012 publications

Author: Tsiper, Maria V.; Sturgis, Jennifer; Avramova, Larisa V.;Parakh, Sl, Fatig, R, Juan-Garcia, A, Li, NY. Rajwa, B; Narayanan, P; Qualls, CW, Robinson, JP, Davisson, VJ.

Title: Differential Mitochondrial Toxicity Screening and Multi-Parametric Data Analysis;

Publication: PLOS ONE  Volume: 7   Issue: 10     Article Number: e45226   DOI: 10.1371/journal.pone.0045226   Published online: OCT 15 2012

 

Author: Bernas, T, Starosolski,R, Robinson, J. Paul., Rajwa, B. 

Title: Application of detector precision characteristics and histogram packing for compression of biological fluorescence micrographs

Publication: Computer Method and programs in Biomedicine, Vol 108, issue 2, Nov, 2012, DOI: 10.1016/j.cmpb.2011.03.012

 

Author: Euiwon Bae, Dawei Ying, Donald Kramer, Valery,Patsekin, Bartek Rajwa, Cheryl Holdman, Jennifer Sturgis, V. Jo, Davisson, J. Paul Robinson;

Title: Portable bacterial identification system based on elastic light scatter patterns;

Publication: Journal of Biological Engineering, 6:12-23, 2012  doi:10.1186/1754-1611-6-12

 

Author: Robinson, J.Paul, Bartek Rajwa, Valery Patsekin, V. Jo Davisson

Title: “Computational analysis of high throughput flow cytometry data”

Publication: Expert Opinions in Drug Discovery, August 2012, Vol. 7, No. 8 , Pages 679-693 doi:10.1517/17460441.2012.693475

 

Author: Euiwon  Bae,  Valery  Patsekin,Bartek  Rajwa,  Arun  K.  Bhunia,  Cheryl  Holdman,V.  Jo  Davisson,  E.  Daniel  Hirleman,  and  J.  Paul  Robinson

Title: "Development of a microbial high-throughput screening instrument based on elastic light scatter patterns",

Publication: Published online 12 April 2012,  Review of Scientific Instruments (Vol.83, Issue 4): URL:http://link.aip.org/link/?RSI/83/044304  DOI: 10.1063/1.3697853   PMCID: PMC3339897

 

Author: Karleigh Huff, Amornrat Aroonnual, Amy E. Fleishman Littlejohn, Bartek Rajwa, Euiwon Bae, Padmapriya P. Banada, Valery Patsekin, E. Daniel Hirleman, J. Paul Robinson, Gary P. Richards and Arun K. Bhunia

Ttitle: "Light-scattering sensor for real-time identification of Vibrio parahaemolyticus, V. vulnificus, and V. cholerae colonies on solid agar plate"

Publication: Microbial Biotechnology. 5: 607–620, 2012 DOI: 10.1111/j.1751-7915.2012.00349.x

 

Author:  Omolola A. Adedokun, Kristin Hetzel, Loran Carleton Parker, Jamie Loizzo, Wilella D. Burgess and J. Paul Robinson;

Title: Using Virtual Field Trips to Connect Students with University Scientists: Core Elements and Evaluation of zipTrips™;

Publication: Journal of Science Education and Technology, Volume: 21   Issue: 5   Pages: 607-618 http://www.springerlink.com/content/q18747j658186370/ DOI: 10.1007/s10956-011-9350-z

Selected 2011 publications
Title: Development of a microbial high-throughput screening instrument based on elastic light scatter patters
Authors:Euiwon Bae,  Valery Patsekin, V. Jo Davisson, Bartek Rajwa, Cheryl Holdman, Arun Bhunia, E. Dan Hirleman, and J. Paul Robinson,
Publication: Reviews of Scientific Instruments, 83:044304, 2012 (author copy)
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Title: Computational Analysis of high-throughput flow cytometry data
Authors:J. Paul Robinson, Bartek Rajwa, Valery Patsekin, V. Jo Davisson
Publication: Expert Opin. Drug Discov. Early View pub
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Title: Information and Communication Technology and social justice: The digital divide
Author: Laura Teodori and J. Paul Robinson
Publication: Analysis:1-2/2011, P 23-36
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Title: 15. Using Scattering to Identify Bacterial Pathogens.
Author:  J.P. Robinson, B.P. Rajwa, E. Bae, V. Patsekin, A.M. Roumani, A.K. Bhunia, J.E. Dietz, V.J. Davisson, M.M. Dundar, J. Thomas and E.D. Hirleman;
Publication: Optics Photonics News, October, 2011 P 21-27
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Title: A Field Trip without Buses
Author: Adedokun, Omolola; Parker, Loran Carleton; Loizzo, Jamie; Burgess, Wilella; Robinson, J. Paul
Publication: Sci Scope 34 no9 p. 52-7, 2011
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Title: Hyperspectral Cytometry at the Single-Cell Level Using a 32-Channel Photodetector
Author: Ge´rald Gre´gori,1,2 Valery Patsekin,1,3 Bartek Rajwa,1,3 James Jones,4 Kathy Ragheb,1,3 Cheryl Holdman,1,3 J. Paul Robinson1,3,4* 1Department of Basic Medical Sciences, School of Veterinary Medicine, Purdue University, West Lafayette, Indiana 47907 2Universite´ de la Me´diterrane´e, CNRS, Laboratoire de Microbiologie, Ge´ochimie et Ecologie Marines, Marseille, 13288, France 3Bindley Bioscience Center, Purdue Univeristy, West Lafayette, Indiana 47907 4Weldon School of Biomedical Engineering, Purdue University, West Lafayette, Indiana 47907
Publication: Cytometry A, 30 Aug, 2011 Early View Published
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Title: High Throughput Flow Cytometry: Speeding up the process has increased the technology's utility in systems biology
Author: Robinson,J.P.; Patsekin,V.; Rajwa,B.; Davisson,V.J.; Li,N.; Narayanan,P.K.
Publication: Genetic Engineering & Biotechnology News April 15, page 20-22, 2011
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Title: High Content-High Throughput drug discovery: Flow cytometry rises to meet the challenge
Author: Robinson,J.P.; Davisson,V.J.; Narayanan,P.K.
Publication: International Drug Discovery, April/May Page 10-14, 2011
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Selected 2010 publications
Title: A Low Complexity SPECK-based codec for multispectral biological images
Author: Awais Mansoor, J. Paul Robinson, Bartek Rajwa;
Publication: Cytometry Part A  77A: 1103-1112, 2010
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Title: Discovering the Unknown: Detection of Emerging Pathogens Using a Label-Free Light-Scattering System
Author: Bartek Rajwa, M. Murat Dundar, Ferit Akova, Amanda Bettasso, Valery Patsekin, E. Dan Hirleman, Arun K. Bhunia, J. Paul Robinson
Publication: Cytometry 77A: 1103–1112, 2010
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Title: AccessScope project: Accessible light microscope for users with upper limb mobility or visual impairments
Author: Awais Mansoor, Wamiq M. Ahmed, Aaa Samarapungavan, John Cirillo,David Schwartz, J. Paul Robinson & Bradley S. Duerstock
Publication: Disability and Rehabilitation: Assistive Technology, March 2010; 5(2): 143–152
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Title: Learning with a non-exhaustive training dataset: a case study: detection of bacteria cultures using optical-scattering technology
Author: M. Murat Dundar , E. Daniel Hirleman, Arun K. Bhunia, J. Paul Robinson and Bartek Rajwa
Publication: Proceedings of the 15th ACM SIGKDD international conference on Knowledge discovery and data mining, ACM Digital Library, doi>10.1145/1557019.1557055
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Selected 2009 publications
Title: A Low Complexity SPECK-based codec for multispectral biological images
Author: Awais Mansoor, J. Paul Robinson, Bartek Rajwa;
Publication: 
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Title: Modeling light propagation through bacterial colonies and its correlation with forward scattering patterns
Author: Euiwon Bae, et al,
Publication: Journal of Biomedical Optics
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Title: Absolute CD4(+) cell count using a plastic microchip and a microscopic cell counter.
Author: Bae SY, Park HC, Oh JS, Yoon SY, Park DW, Choi IK, Kim HJ, Oh JH, Hur DS, Chung C, Chang JK, Robinson JP, Lim CS.
Publication: Cytometry B Clin Cytom. 2009 Sep;76(5):345-53
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Title: System automation for a bacterial colony detection and identification instrument via forward scattering;
Author: Euiwon Bae, Amornrat Aroonnual, Arun K Bhunia, J Paul Robinson and E Daniel Hirleman;
Publication: Meas. Sci. Technol. 20 015802 (9pp), 2009 doi: 10.1088/0957-0233/20/1/015802
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Title: AccessScope Project: Accessible Light Microscope for Users with Upper Limb Mobility or Visual Impairments
Author: Awais Mansoor, Wamiq M. Ahmed, Ala Samarapungavan, John Cirillo, David Schwarte, J. Paul Robinson, and Bradley S. Duerstock
Publication: Disability and Rehabilitation: Assistive Technology
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Title: Letter: Low Cost Diagnostics
Author: J. Paul Robinson
Publication: CE News, June 1, 2009
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Title: Label-free detection of multiple bacterial pathogens using light-scattering sensor
Author: Padmapriya P. Banada, Karleigh Huff, Euiwon Bae, Bartek Rajwa, Amornrat Aroonnual, Bulent Bayraktar, Abrar Adil, J. Paul Robinson, E. Daniel Hirleman, Arun K. Bhunia
Publication: Biosensors and Bioelectronics 24 (2009) 1685–1692
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Title: Subject Classification Obtained by Cluster Analysis and Principal Component Analysis Applied to Flow Cytometric Data
Author: Enrico Lugli, Marcello Pinti, Milena Nasi, Leonarda Troiano, Roberta Ferraresi, Chiara Mussi, Gianfranco Salvioli, Valeri Patsekin, J. Paul Robinson, Caterina Durante, Marina Cocchi, and Andrea Cossarizza
Publication: Cytometry Part A 71A:334–344, (2007)
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Selected 2008 publications
Title: High speed classification of individual bacterial cells using a model-based light scatter system and multivariate statistics.
Author: Venkatapathi M, Rajwa B, Ragheb K, Banada PP, Lary T, Robinson JP, Hirleman ED
Publication: Appl Opt. 2008 Feb 10;47(5):678-86. PMID: 18268779 adobe logoClick Here to View
Title: Quadratic form: a robust metric for quantitative comparison of flow cytometric histograms.
Author: Bernas T, Asem EK, Robinson JP, Rajwa B
Publication: Cytometry A. 2008 Aug;73(8):715-26. PMID: 18561196 adobe logoClick Here to View
Title: 'Living cantilever arrays' for characterization of mass of single live cells in fluids.
Author: Park K, Jang J, Irimia D, Sturgis J, Lee J, Robinson JP, Toner M, Bashir R
Publication: Lab Chip. 2008 Jul;8(7):1034-41. Epub 2008 Jun 11. PMID: 18584076
Title: Application of wavelet denoising to improve compression efficiency while preserving integrity of digital micrographs.
Author: Bernas T, Asem EK, Robinson JP, Rajwa B
Publication: J Microsc. 2008 Jul;231(Pt 1):81-96. PMID: 18638192 adobe logoClick Here to View
Title: Automated classification of bacterial particles in flow by multiangle scatter measurement and support vector machine classifier.
Author: Bartek Rajwa, Murugesan Venkatapathi, Kathy Ragheb, Padmapriya P. Banada, E. Daniel Hirleman, Todd Lary, J. Paul Robinson
Publication: Cytometry A. 2008 Apr;73(4):369-79. PMID: 18163466 adobe logoClick Here to View
Title: Analysis of time-resolved scattering from macroscale bacterial colonies
Author: Euiwon Bae, Padmapriya P. Banada, Karleigh Huff, Arun K. Bhunia, J. Paul Robinson, E.Dan Hirleman
Publication: Journal of Biomedical Optics 13,1, 014010 January/February 2008 adobe logoClick Here to View
Title: "XML-based data model and architecture for a knowledge-based gridenabled problem-solving environment for high-throughput biological imaging,"
Author: W. M. Ahmed, D. Lenz, J. Liu, J. P. Robinson, and A. Ghafoor
Publication: IEEE Trans. Inf. Technol. Biomed., vol. 12, no. 2, pp. 226-240, Mar. 2008.
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Selected 2007 publications
Title: Subject Classification Obtained by Cluster Analysis and Principal Component Analysis Applied to Flow Cytometric Data
Author: Enrico Lugli, Marcello Pinti, Milena Nasi, Leonarda Troiano, Roberta Ferraresi, Chiara Mussi, Gianfranco Salvioli, Valeri Patsekin, J. Paul Robinson, Caterina Durante, Marina Cocchi, and Andrea Cossarizza
Publication: Cytometry Part A 71A:334–344, (2007)
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Title: A numerical recipe for accurate image reconstruction from discrete orthogonal moments
Author: Bulent Bayraktar, Tytus Bernas, J. Paul Robinson, and Bartek Rajwa
Publication: Pattern Recognition 40 659 – 669, (2007)
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Title: Semantic Analysis of Biological Imaging data: Challenges and opportunities
Author: Wamiq Manzoor Ahmed, Muhammad Naeem Ayyaz, Bartek Rajwa, Farrukh Khan, Arif Ghafoor and J. Paul Robinson
Publication: International Journal of Semantic Computing, Vol. 1:67–85, (2007)
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Title: Single- and two-photon spectral imaging of intrinsic fluorescence of transformed human hepatocytes
Author: Rajwa B, Bernas T, Acker H, Dobrucki J, Robinson JP
Publication: Microscopy Research and Technique 70:869-79, 2007
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Title: Compound jet instability in a microchannel for mononuclear compound drop formation
Author: S Y Lee, C Snider, K Park and J P Robinson
Publication: Journal of Micromechanics and Microengineering 17 (2007) 1558–1566
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Title: Bacteria-mediated delivery of nanoparticles and cargo into cells
Author: Demir Akin, Jennifer Sturgis, Kathy Ragheb, Debby Sherman, Kristin Burkholder, J. Paul. Robinson, Arun K. Bhunia, Sulma Mohammed and Rashid Bashir
Publication: Nature Nanotechnology, 2, 441 - 449 (2007)
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Title: Intracellularly grown gold nanoparticles as potential surface-enhanced Raman scattering probes
Author: Ali Shamsaie, Magdalena Jonczyk, Jennie Sturgis, J. Paul Robinson, Joseph Iradayaraj
Publication: Journal of Biomedical Optics. 12:020202-1, 2007
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Title: Precision of light intensity measurement in biological optical microscopy
Author: Bernas T, Barnes D, Asem EK, Robinson JP, Rajwa B.
Publication: Journal of Microscopy 226(Pt 2):163-74, 2007
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Title: Optical forward-scattering for detection of Listeria monocytogenes and other Listeria species
Author: Banada PP, Guo S, Bayraktar B, Bae E, Rajwa B, Robinson JP, Hirleman ED, Bhunia AK
Publication: Biosensors and Bioelectronics 22(8):1664-71, 2007
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Title: Variation in genome size of argasid and ixodid ticks
Author: Nicholas S. Geraci, J. Spencer Johnston, J. Paul Robinson, Stephen K. Wikel, Catherine A. Hill
Publication: Insect Biochemistry and Molecular Biology 37:399–408,(2007)
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Title: Hybridoma Ped-2E9 cells cultured under modified conditions can sensitively detect Listeria monocytogenes and Bacillus cereus
Author: Pratik Banerjee, Mark T. Morgan, Jenna L. Rickus, Kathy Ragheb, Carlos Corvalan, J. Paul Robinson, Arun K. Bhunia
Publication: Applied Microbial Biotechnology (2007) 73:1423-1434
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Selected 2006 publications
Title:  Optical forward-scattering for detection of Listeria monocytogenes and other Listeria species
Author: Padmapriya P. Banada, Songling Guo, Bulent Bayraktar, Euiwon Bae, Bartek Rajwa, J. Paul Robinson, E. Daniel Hirleman, Arun K. Bhunia
Publication: Biosensors and Bioelectronics 22 (2007) 1664-1671
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Title:  Phi29 pRNA Vector for Efficient Escort of Hammerhead Ribozyme Targeting Survivin in Multiple Cancer Cells
Author: Hongyun Liu, Songchuan Guo, Richard Roll, Jie Li, Zhijuan Diao, Ningsheng Shao, Mark R. Riley, Alexander M. Cole, J. Paul Robinson, Nicholas Snead, Guanxin Shen, Peixuan Guo
Publication: Cancer Biology & Therapy 6:5, e1-e9 May 2007
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Title:  The design and construction of a cost-efficient confocal laser scanning microscope
Author: Peng Xi, Bartlomiej Rajwa, James T. Jones, and J. Paul Robinson
Publication: American Journal of Physics 75 (3), March 2007, pages 203-207
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Title:  Sol-gel derived materials as substrates for neuronal differentiation: effects of surface features and protein conformation
Author: Sabrina S. Jedlicka, Janice L. McKenzie, Silas J. Leavesley, Kenneth M. Little, Thomas J. Webster, J. Paul Robinson, David E. Nivens, and Jenna L. Rickus
Publication: Journal of Materials Chemistry, 2006, 16, 3221-3230
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Title:  Compression of Fluorescence Microscopy Images Based on the Signal-to-Noise Estimation
Author: Tytus Bernas, Elikplimi K. Asem, J. Paul Robinson, and Bartek Rajwa
Publication: Microscopy Research and Technique 69:1-9, 2006
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Title:  Automated classification and recognition of bacterial particles in flow by multi-angle scatter measurement and a support-vector machine classifier
Author: Bartek Rajwa, Murugesan Venkatapathi, Kathy Ragheb, Padmapriya P. Banada, E. Daniel Hirleman, Todd Lary, and J. Paul Robinson
Publication: Photonics West 20-25 January 2007 presentation
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Title:  Application of quantitative morphological cytometry for evaluation of shear stress: potential for HCS systems.
Author: Bartek Rajwa, Dominik Lenz, Bulent Bayraktar, Silas Leavesley, and J. Paul Robinson
Publication: Photonics West 20-25 January 2007 presentation
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Title:  Measurement and analysis of angle-resolved scatter from small particles in a cylindrical microchannel
Author: Murugesan Venkatapathi, Gerald Gregori, Kathy Ragheb, J. Paul Robinson, and E. Dan Hirleman
Publication: Applied Optics Vol. 45, No. 10, 1 April 2006, 2222-2231
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Selected 2005 publications
Title:  Confocal Fluorescence Imaging of Photosensitised DNA Denaturation in Cell Nuclei
Author: Tytus Bernas, E.K.Asem, J.P.Robinson, P.R.Cook, J.W.Dobrucki
Publication: Photochemistry and Photobiology, in press
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Title:  Multispectral cytometry of single bio-particles using a 32-channel detector
Author: J. Paul Robinson, Bartek Rajwa, Gerald Gregori, James Jones, and Valery Patsekin
Publication: Proc of SPIE vol. 5692, pages 359-365, 2005
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Title:  AOTF-based system for image cytometry
Author: Bartek Rajwa, Wamiq Ahmed, Murugesan Venkatapathi, Gerald Gregori, Feng Jin, Jolanta Soos, Sudhir Trivedi, and J. Paul Robinson
Publication: Proc SPIE vol. 5694, pages 1-8, 2005
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Title:  Integrating Cytomics and Proteomics
Author: Tytus Bernas, Gerald Gregori, Eli K. Asem, and J. Paul Robinson
Publication: Molecular & Cellular Proteomics 5.1, pages 2-13, 2006
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Title:  Loss of image quality in photobleaching during microscopic imaging of fluorescent probes bound to chromatin
Author: Tytus Bernas, J. Paul Robinson, Elikplimi K. Asem, Bartek Rajwa
Publication: Journal of Biomedical Optics 10(6), 064015, November / December 2005
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Title:  Mack Fulwyler in His Own Words
Author: J. Paul Robinson
Publication: Cytometry Part A 67A:61-67 (2005)
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Title:  AFM/CLSM Data Visualization and Comparison Using An Open-Source Toolkit
Author: Bartek Rajwa, Helen A. Mcnally, Padma Varadharajan, Jennifer Sturgis, and J. Paul Robinson
Publication: Microscopy Research and Technique 64:176-184 (2004)
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Title:  Distribution of adsorbed antigen in mono-valent and combination vaccines
Author: Garry L. Morefield, Harm HogenEsch, J. Paul Robinson, Stanley L. Hem
Publication: Vaccine 22 (2004)
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Title:  Adaptive Image-Processing Technique and Effective Visualization of Confocal Microscopy Images
Author: Yinlong Sun, Bartek Rajwa, and J. Paul Robinson
Publication: Microscopy Research and Technique 64:156-163 (2004)
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Title:  Simultaneous Mechanical Loading and Confocal Reflection Microscopy for Three-Dimensional Microbiomechanical Analysis of Biomaterials and Tissue Constructs
Author: Sherry L. Voytik-Harbin, Blayne A. Roeder, Jennifer E. Sturgis, Klod Kokini, and J. Paul Robinson
Publication: Microscopy and Microanalysis 9, 74-85, 2003
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Selected 2004 publications
Title:  Multispectral Cytometry: The Next Generation
Author: J. Paul Robinson
Publication: Biophotonics International, October 2004, 36-40
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Title:  Local, three-dimensional strain measurements within largely deformed extracellular matrix constructs.
Author: Roeder BA, Kokini K, Robinson JP, Voytik-Harbin SL.
Publication: J Biomech Eng. 2004 Dec;126(6):699-708.(2004)
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Title:  Adaptive Image-Processing Technique and Effective Visualization of Confocal Microscopy Images
Author: Yinlong Sun, B.Rajwa, J.P.Robinson
Publication: Microscopy Research and Technique 64:156-163 (2004)
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Title:  AFM/CLSM Data Visualization and Comparison Using An Open-Source Toolkit
Author: Bartek Rajwa, Helen A. Mcnally, Padma Varadharajan, Jennifer Sturgis, J. Paul Robinson
Publication: Microscopy Research and Technique 64:176-184 (2004)
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Title:  AFM/CLSM Data Visualization and Comparison Using An Open-Source Toolkit
Author: Bartek Rajwa, Helen A. Mcnally, Padma Varadharajan, Jennifer Sturgis, J. Paul Robinson
Publication: Microscopy Research and Technique 64:176-184 (2004)
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Title:  Flow Cytometry
Author: J. Paul Robinson
Publication: Encyclopedia of Biomaterials and Biomedical Engineering, 2004, pp 630-640
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Selected 2003 publications
Title: Automated quantification and reconstruction of collagen matrix from 3D confocal datasets
Author: J. Wu, B. Rajwa, D.L.Filmer, C.M. Hoffmann, B.Yuan, C. Chiang, J. Sturgis, J.P.Robinson
Publication: Journal of Microscopy 2003, 210 Pt 2,: 158-165
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Title: Mitochondrial complex I inhibitor rotenone induces apoptosis through enhancing mitochondrial reactive oxygen species production
Author: Li N, Ragheb KE, Lawler G, Sturgis J, Rajwa B, Melendez JA, Robinson JP  This paper has been cited over 500 times
Publication: J Biol Chem 2003; 278: 8516 - 8525
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Title: DPI induces mitochondrial superoxide mediated apoptosis
Author: Nianyu Li, Kathy Ragheb, Gretchen Lawler, Jennie Sturgis, Bartek Rajwa, J. Andres Melendez, and J.Paul Robinson
Publication: Free Radical Biology & Medicine, Vol. 34, No. 4, pp. 465–477, 2003
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Title: Simultaneous mechanical loading and confocal reflection microscopy for 3D micro-biomechanical analysis of biomaterials and tissue constructs.
Author: Voytik-Harbin, S.L., Roeder, B.A., Sturgis, J.E., Kokini, K., and Robinson, J.P.
Publication: Microscopy and Microanalysis 9(1):74-85. 2003.
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Title: Analysis of Orientations of Collagen Fibers by Novel Fiber-Tracking Software.
Author: Jun Wu, Bartlomiej Rajwa, David L. Filmer, Christoph M. Hoffmann, Bo Yuan, Ching-Shoei Chiang, Jennie Sturgis, and J. Paul Robinson
Publication: Microscopy and Microanalysis 9, 574–580, 2003
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Title: Cytometric Investigations of Phagocomes, Mitochondria and Acidic Granules in Human Neutrophils
Author: Bassoe-C-F, Nianyu Li, Kathy Ragheb, Gretchen Lawler, Jennie Sturgis, J. Paul Robinson
Publication: Cytometric Investigations of Phagosomes, Mitochondria and Acidic Granules in Human neutrophils. Cytometry 51B(1):21-9, 2003
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Title: Micro-assembly of Functionalized Particulate Monolayer on C18-Derivatized SiO2 Surfaces
Author: Tom T. Huang, Tao Geng, Demir Akin, Woo-Jin Chang, Jennifer Sturgis, Rashid Bashir, Arun K. Bhunia,J. Paul Robinson, Michael R. Ladisch
Publication: Biotechnology and Bioengineering, 83,(4), 416-427, 2003
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Title: Composite surface for blocking bacterial adsorption on protein biochips.
Author: Huang TT, Sturgis J, Gomez R, Geng T, Bashir R, Bhunia AK, Robinson JP, Ladisch MR.
Publication: Biotechnol Bioeng. 2003 Mar 5;81(5):618-24

Selected 2002 Publications
Title: Tensile mechanical properties of three-dimensional type I collagen extracellular matrices with varied microstructure.
Author: Roeder, B.A., Kokini, K., Sturgis, J.E., Robinson, J.P., and Voytik-Harbin, S.L.
Publication: J Biomech Eng 124:214-222, 2002.
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Title: The increase of reactive oxygen species and their inhibition in an isolated guinea pig spinal cord compression model.
Author: Luo,J, Li, N., Robinson, J.Paul, & Shi, R.
Publication: J Biomech Eng 124:214-222, 2002.
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Title: Micromechanics of Extracellular Matrix: Three-Dimensional Microstructure Under Load.
Author: Roeder, B., Kokini, K., Sturgis, J., Robinson, J.P., and Voytik-Harbin, SL.
Publication: Advances in Bioengineering. In-press 2002.
Title: Detection of reactive oxygen species by flow cytometry after spinal chord injury.
Author: Luo, J. Li, N., Robinson, J. Paul, & Shi, R.
Publication: Journal of Neuroscience Methods 120: 105-112, 2002 adobe logoClick Here to View

Selected 2001 Publications
Title: “Microfluidic Biochip for Impendence Spectroscopy of Biological Species”
Author: Gomez, R., Bashir, R., Sarikaya, A., Ladisch, M.R., Sturgis, J., Robinson, J.P., Geng, T., Bhunia, A.K., Apple, H.L., and Wereley, S.T.
Publication: Biomedical Microdevices 3: 201-209, 2001.adobe logoClick Here to View
Title: CD-ROMs in the Classroom.
Author: Witham, S.A., Krockover, G.H., Compton, S.J., Cross, V.D., Eichinger, D., and Robinson, J.P.
Publication: The Science Teacher, 72-74, 2001.
Title: Adsorption of avidin on microfabricated surfaces for protein biochip applications.
Author: Bashir R, Gomez R, Sarikaya A, Ladisch MR, Sturgis J, Robinson JP.
Publication: Biotechnol Bioeng. 20;73(4):324-8, 2001.
Title: Principles of Confocal Microscopy
Author: J. Paul Robinson
Publication: Methods Cell Biol. ;63:89-105, 2001
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Title: Flow cytometric analysis of microorganisms.
Author: Sincock SA, Robinson JP.
Publication: Methods Cell Biol. ;64:511-37, 2001
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Title: Three-dimensional imaging of extracellular matrix and extracellular matrix-cell interactions.
Author: Voytik-Harbin SL, Rajwa B, Robinson JP.
Publication: Methods Cell Biol. ;63:583-97, 2001
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Selected 2000 Publications
Title: Basal lamina of avian ovarian follicle: influence on morphology of granulosa cells in-vitro
Author: Elikplimi K. Asem, Shulin Feng, Susan R. Stingley-Salazar, John J. Turek, Augustine T. Peter, J. Paul Robinson
Publication: Comparative Biochemistry and Physiology Part C 125:189-201, 2000
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Title: Characterization of the interaction of Escherichia coli heat-stable enterotoxin with its putative receptor on the intestinal tract of newborn calves
Author: Ahmad M. Al-Majali, Elikplimi K. Asem , Carlton H. Lamar, J. Paul Robinson, M. James Freeman, A. Mahdi Saeed
Publication: FEMS Immunology and Medical Microbiology 28:97-104, 2000
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Title: Time-Lapse Confocal Reflection Microscopy of Collagen Fibrillogenesis and Extracellular Matrix Assembly In Vitro. 
Author: Brightman, A.O., Rajwa, B.P., Sturgis, J.E., McCallister, M.E., Robinson, J.P., and Voytik-Harbin, S.L.
Publication: Biopolymers, 54:222-234, 2000.
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Title: Identification of some components of basal lamina of avian ovarian follicle
Author: E. K. Asem, S. R. Stingley-Salazar, J. P. Robinson, J. J. Turek
Publication: Poultry Science 79:589-601, 2000
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Title: Infection of pigs by  Aujeszky’s disease virus via the breath of intranasally inoculated pigs.
Author: Gillespie, R.R., Hill, M.A., Kanitz, C.L., Knox, K.E., Clark, L.K., and Robinson, J.P.
Publication:Res Vet. Sci., 68(3):217-222, 2000.
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Title: Time-lapse confocal reflection microscopy of collagen fibrillogenesis and extracellular matrix assembly in vitro
Author: A. O. Brightman, B. P. Rajwa, J. E. Sturgis, M. E. McCallister, J. Paul Robinson, S. L. Voytik-Harbin
Publication: Biopolymers, Vol. 54, 222-234, 2000
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Title: White-Light Scanning Digital Microscopy
Author: J. Paul. Robinson, Ben Gravely
Publication: J. Paul Robinson & G. F. Babcock (Eds.), Emerging Tools for Single Cell Analysis: Advanced in Optical Measurement Technologies. (pp. 291-306). New York: Wiley-Liss, 2000
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Title: Inactivation Responses of Cryptosporidium parvum to UV Radiation and Gamma Radiation
Author: Heather E. Landis, John E. Thompson, J. Paul Robinson, Ernest R. Blatchley III
Publication: Preceedings of the AWWA Water Quality Technology Conference 2000, Salt Lake City, UT
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Title: Rapid purification of transfected porcine muscle cells.
Author: Blanton JR Jr, Robinson JP, Gerrard DE, Bidwell CA, Grant AL.
Publication: Methods Cell Sci.;22(2-3):217-23, 2000

Selected 1999 Publications
Title: Insulin modulates intestinal response of suckling mice to the Escherichia coli heat-stable enterotoxin
Author: Ahmad M. Al-Majali, Elikplimi K. Asem, Carlton H. Lamar, J.Paul Robinson, M. James Freeman, Mahdi Saeed
Publication: Mechanisms in the Pathogenesis of Enteric Diseases, Advances in Experimental Medicine and Biology 473:113-123, 1999
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Title: Microscope Image Processing and Analysis
Author: J. Paul Robinson, John Turek
Publication: Wiley Encyclopedia of Electrical and Electronics Engineering, Volume 13 p.p. 9-21. John G. Webster (ed) John Wiley & Sons, New York, NY, 1999
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Title: Effect of basal lamina on progesterone production by chicken granulosa cells in vitro—influence of follicular development. 
Author: Asem, E.K., Stingley-Salazar, S.R., Robinson, J.P., and Turek, J.J. 
Publication:

Comp. Biochem. Physiol. C. 125(2):233-244, 2000.

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Title: Characterization of the interaction of Escherichia coli heat-stable enterotoxin (Sta) with its intestinal putative receptor in various age groups of mice, using flow cytometry and binding assays. 
Author: Al-Majali, A.M., Robinson, J.P., Asem, E.K., Lamar, C., Freeman, M.J., and Saeed, A.M.
Publication: Anim. Sci. 49(3):254-9, 1999.
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Title: Insulin modulates intestinal response of suckling mice to the Escherichia coli heat-stable enterotoxin.
Author: Al-Majali, AM, Asem, E.K., Lamar, C, Robinson, J.P., Freeman, J., and Saeed, A.M.
Publication: Adv. Exp. Med. Biol., 473:113-23, 1999
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Title: Use of flow cytometry to measure the interaction between Escherichia coli heat-stable enterotoxin and its intestinal receptor in mice. 
Author: Al-Majali, A.M., J.P. Robinson, E.K. Asem, C. Lamar, M.J. Freeman, and A.M. Saeed: 
Publication: J.Immunol.Meth. 222:65-72, 1999.
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Title: Age- dependent variation in the density and affinity of Escherichia coli heat-stable enterotoxin receptors in mice
Author: Al-Majali, A.M., J.P. Robinson, E.K. Asem, C. Lamar, J. Freeman, and A.M. Saeed:
Publication: Adv.Exp.Med.Biol. 473:137-145, 1999.
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Title: Studies on the mechanism of diarrhoea induced by Escherichia coli heat-stable enterotoxin (Sta) in newborn calves.
Author: Al-Majali, A.M., Asem, e.K., Lamar, C.H., Robinson, J.P., Freeman, M.J., and Saeed, A.M.
Publication: Vet. Res. Commun., 24(5):327:38, 2000.
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Title: Overview of flow cytometry and microbiology.
Author: Robinson, J.P.
Publication: In Current Protocols in Cytometry. J.P. Robinson, Z. Darzynkiewicz, P.N. Dean, A. Orfao, P.S. Rabinovitch, C.C. Stewart, H.J. Tanke, and L.L. Wheeless, eds. New York, John Wiley, 1999.

Selected 1998 Publications
Title: Neutrophil-Endothelial Cell Interactions
Author: Wayne 0. Carter, J. Paul Robinson
Publication: J. P. Robinson & G. F. Babcock (Eds.). Phagocyte Function: A Guide for Research and Clinical Evaluation (pp. 253-276). New York: Wiley-Liss, 1998
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Title: Oxygen and Nitrogen Reactive Metabolites and Phagocytic Cells
Author: J. Paul Robinson
Publication: J.Paul Robinson & George Babcock Eds: Phagocyte Functions: A guide for research and Clinical Evaluation. Wiley-Liss, 1998
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Title: Small Intestinal Submucosa: A Tissue-Derived Extracellular Matrix That Promotes Tissue-Specific Growth and Differentiation of Cells in Vitro
Author: Sherry L. Voytik-Harbin, Andrew O. Brightman, Beverly Z. Waisner, J. Paul Robinson, Carlton H. Lamar
Publication: Tissue Engr., 4 (2): 157-174, 1998 Mary Ann Liebert, Inc., 1998
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Title: Impairment of human neutrophil oxidative burst by polychlorinated biphenyls: inhibition of superoxide dismutase activity.
Author: Narayanan, P. K., Carter, W. O., Ganey, P. E., Roth, R. A., Voytik-Harbin, S. L., and Robinson, J. P.
Publication: J. Leuk. Biol., 63: 216-224, 1998.
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Title: Isolation of two populations of myoblasts from porcine skeletal muscle.
Author: Blanton, J.R., Jr., A.L. Grant, D.C. McFarland, J.P. Robinson, and C.A. Bidwell: 
Publication: Muscle Nerve 22:43-50, 1999
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Title: Effect of dietary insulin on the response of suckling mice enterocytes to Escherichia coli heat-stable enterotoxin. 
Author: . Al-Majali, A., E. Asem, C. Lamar, J.P. Robinson, M.J. Freeman, and M. Saeed:
Publication: Vet.Res. 29:527-536, 1998.
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Selected 1997 Publications
Title: Functional Assays by Flow Cytometry (chapter 26)
Author: J. Paul Robinson, Wayne O. Carter, And Padmakumar Narayanan
Publication: Immune cell phenotyping and flow cytometric analyisis p.p. 245-254, Manual of Clinical Laboratory Immunology (5th ed.): N. R. Rose, E. de Marcario, J. D. Folds, H. C. Lane, R. Nakumura (Eds.) Am. Soc. Microbiology, 1997
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Title: Defects in intracellular oxidative metabolism of neutrophils undergoing apoptosis.
Author: Narayanan PK, Ragheb K, Lawler G, Robinson JP.
Publication: J. Leukoc Biol 61:481-488, 1997.adobe logoClick Here to View
Title: A primer on computers, Information Management, and Internet Access for cytometry.
Author: Robinson JP and G Valet.
Publication: Clin. Immunol. News. 17:7-13, 1997.
 

Selected 1994 Publications
Title: Functional Measurements Using HL-60 Cells
Author: J. Paul Robinson, Padma Kumar Narayanan, Wayne O. Carter
Publication: Z. Darzynkiewicz, J. P. Robinson, and H. Crissman (Eds.), Methods in Cell Biology, Vol 41, p.p. 423-436. Academic Press, 1994.
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Title: Ultrastructure and cytochemical staining characteristics of canine natural killer cells.
Author: Knapp DW, Turek JJ, DeNicola DB, Chan TC, Carter WO, Snyder PW, Robinson JP.
Publication: Anat. Record. 243(4):509-15, 1995.
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Title: Oxidative Product Formation Analysis by Flow Cytometry
Author: J. P. Robinson, Wayne O. Carter, Padma Kumar Narayanan
Publication: Methods in Cell Biology, Vol 41, p.p. 461-467. Academic Press, 1994
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Title: T lymphocyte development and function in dogs with X-linked severe combined immunodeficiency.
Author: Somberg RL, Robinson JP, Felsburg PJ
Publication:

J Immunol. 153(9):4006-15, 1994.

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Title: Leucine Aminopeptidase Activity by Flow Cytometry
Author: John J. Turek, J. Paul Robinson
Publication: Methods in Cell Biology, Vol 41, p.p. 461-467. Academic Press, 1994
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Title: Neural network classification of acute leukemias using flow cytometric analysis data;
Author: D. Maguire, G.B. King, S. Kelley, & J. Paul Robinson
Publication:Thirteenth Southern Biomedical Engineering Conference, University dist. Columbia, April 16-17 1994 (peer reviewed paper)
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Title: Activated neutrophils from rat injured isolated hepatocytes.
Author: Ganey PE, Bailie MB, VanCise S, Colligan ME, Madhukar BV, Robinson JP, Roth RA.
Publication:Lab Invest. ;70(1):53-60, 1994.
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Title: Intracellular Superoxide and Hydrogen Peroxide Anion detection in Endothelial cells
Author: Wayne O. Carter, Padmakumar Narayanan, and J. Paul Robinson
Publication: Journal of Leukocytel Biology, Vol 55:253-258,1994
NOTE: this paper has been cited over 500 times as a foundation paper in endothelial cell oxidative measurement
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Selected Pre-1993 Publications
Title: Flow Cytometric Analysis of Granulocytes
Author: J. Paul Robinson, Wayne O. Carter
Publication: Clinical Flow Cytometry: Principles and Application, Kenneth D. Bauer, Ricardo E. Duque, T. Vincent Shankey (Eds.), Williams and Wilkins, 1993
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Title: Neutrophil function after exposure to polychlorinated biphenyls in vitro.
Author: Ganey, P.E. Sirois, J.E., Denison, M., Robinson, J. P. and Roth, R.A.: 
Publication:Environ. Health Perspect. 101:430-434, 1993.
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Title: Fractionation of bovine spermatozoa for sex selection:  A rapid immunomagnetic technique to remove spermatozoa that contain the H-Y antigen. 
Author: Peter, A.T., Jones, P.P. and Robinson, J. P.:
Publication:

Theriogenology 40:117-1185, 1993.

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Title: "New Technologies for Use in Toxicology Studies; Monitoring the effects of Xenobiotics on Immune function"

Author: J. Paul Robinson & Richard Pfeifer
Publication: Journal of American College of Toxicology, 9:303-317, 1990.

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Title: Integration of a barcode reader with a commercial flow cytometer

Author: J. Paul Robinson, D. Maguire, G. King, S. Kelley, Durack, G:
Publication: Cytometry 13:193-197, 1992.

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Title: Rapid Multivariate Analysis and Display of cross-reacting antibodies on Human Leukocytes.

Author: J. Paul Robinson, K. Ragheb, G. Lawler, S. Kelley, & G. Durack
Publication: Cytometry 13:75-82,1992

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Title: Detection of Canine interleukin-2 receptors by flow cytometry.

Author: Somberg, R.L., J. Paul Robinson, P. Felsburg:
Publication: J.Vet.Immunopathol.33:17-24, 1992.

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Title: Time Interval Gating for analysis of cell function using flow cytometry

Author: Durack, G., Lawler, G., Kelley, S., Ragheb, K.,Roth, R.A., Ganey, P., and  Robinson, J. Paul:
Publication: Cytometry, 12:701-706, 1991.

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Title: An innovation in flow cytometry data collection & analysis producing a correlated multiple sample analysis in a single file

Author: Robinson, J. Paul, Durack, Gary & Kelley, Stephen:
Publication: Cytometry 12:82-90, 1991.

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Title: 3-Methylindole-induced splenotoxicity II. Functional Analysis of immune parameters and lymphocyte phenotyping by flow cytometry.

Author: L.W. Updyke, H.L. Yoon,  J. Paul Robinson, A.L. Kiorpes, C.B. Marcus, R.W.
Publication:  Tox. Appl. Pharm. 109:391-398, 1991.

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Title: "Diagnostic Potential of Functional Measurements"

Author: J. Paul Robinson & K. Plocki:
Publication: in Diagnostic Flow Cytometry, Ed , Williams & Wilkins, 1990.
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Title: "Ca++ redistribution from bound to free form  is required for Tumor Necrosis Factor actions in 30A5 preadipocytes"

Author: Kweon Haeng Lee, K. L. White, J. Paul Robinson, Ki-Han Kim:
Publication: Molecular Endocrinology 4:1671-1678, 1990
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Title: Oxidative product formation in irradiated neutrophils:  A flow cytometric analysis

Author: Wolber, R.A., Duque, R.E., Robinson, J. Paul, Oberman, H.A.: 
Publication: Transfusion27:167-170, 1987.

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Title: The effect of intravenous immunoglobulin on the in vitro function of human neutrophils.

Author: Lawton, John W.M., Robinson, J. Paul, Till, Gerd O.;
Publication: Immunopharmacology. 18:97-105, 1989.

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Title: Flow Cytometric Evaluation of Leukocyte Function

Author: Stelzer, G.T., Robinson, J. Paul
Publication: Diag. & Clin. Immunol. 5:223-231, 1988.

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Title: Measurement of intracellular fluorescence of human monocytes indicative of oxidative metabolism.

Author: Robinson, J. Paul, L.H. Bruner, C.-F. Bassoe, J.L. Hudson, P.A. Ward and S.H. Phan.
Publication: J. Leuk. Biol. 43:304-310, 1988.

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Title: Measurement of anti-neutrophil antibodies by flow cytometry:  Simultaneous detection of antibodies against monocytes and lymphocytes

Author: Robinson, J. Paul., R.E. Duque, L. Boxer, P.A. Ward, J.L. Hudson; 
Publication: Diag. & Clin. Immunol. 5:163-170,1987.

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Title: Chlamydial antibody crossreactivity with peripheral blood mononuclear cells of patiuents with anklyosing spondylitis: the role of HLA B27 

Author:  Wakefield, D. Easter, J., J.P Robinson, D. Graham, R. Penny 
Publication: Clin Exp Immunol 63:49-57, 1986
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Title: The chemiluminescence response of normal human leukocytes to Chlamydia trachomatis.

Author:  Robinson, J. Paul, Wakefield, D., Breit, S.N., Graham, D., and Penny, R.: 
Publication: Diagnostic Immunology 3:119-125,1985.

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Title: The effect of alpha-1-antitrypsin on PWM driven IgG synthesis.

Author:  Breit, S.N., Hansen, P., Wakefield, D., Robinson, J. Paul, and Penny, R
Publication: J. Clin. Lab. Immunol. 14:191-193,1984.

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Title: Immunoregulation by alpha 1 antitrypsin

Author:  Breit, S.N., Robinson, J. Paul, Luckhurst, E., Clark, P. and Penny, R.: 
Publication: J. Clin. Lab. Immunol. 7:127-131,1982.

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Title: Chemiluminescent response to pathogenic organisms.  Normal human polymorphonuclear leukocytes.

Author:  Robinson, J. Paul, Wakefield, D., Breit, S.N., Easter, J., and Penny, R
Publication: Infect.Immun. 43:744-752,1984.

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Title: The effect of alpha-1-antitrypsin on PWM driven IgG synthesis.

Author:  Breit, S.N., Hansen, P., Wakefield, D., Robinson, J. Paul, and Penny, R.: 
Publication: J. Clin. Lab. Immunol. 14:191-193,1984.

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Title: Letter to the editor on HLA B27 and pathogens

Author:  Wakefield, D. Robinson, J.P. Penny R
Publication: New Engl. J. Medicine, 310: 1539-1540, 1984

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Title:Immunological features of HLA B27+ anterior uveitis.

Author:  Wakefield, D., Easter, J., Robinson, J. Paul, and Penny, R.: 
Publication: Aust. J. Opthalmol. 11:15-19,1983.

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Title: The role of alpha-1-antitrypsin deficiency in the pathogenesis of immune disorders.

Author:  Breit, S.N., Wakefield, D., Robinson, J. Paul, and Penny, R.:
Publication: Clin. Immunol. Immunopathol. 35:363-380,1985.

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Title: Anterior Uveitis.

Author:  Wakefield, D., Robinson, J. Paul, Breit, S.N. and Penny, R.
Publication: InImmunogenetics in Rheumatology, Excerpta Medica, Amsterdam.  1983.

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Title: Familial occurrence of alpha-1-antitrypsin deficiency and Weber-Christian disease.

Author:  Breit, S.N., Clarke, P., Robinson, J. Paul, Luckhurst, E., Dawkins, R.L., and Penny, R:
Publication: Arch.Dermatol. 119:198-202, 1983.

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Title: Chemiluminescence response in normal human phagocytes. 2. Effect of Paraproteins.

Author:  Robinson, J. Paul and Penny, R.
Publication: J. Clin. Lab. Immunol. 7:219-221, 1982.

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Title: Chemiluminescence response in normal human phagocytes.  1. Automated measurements using a standard liquid scintillation counter.

Author: Robinson, J. Paul, and Penny, R.: 
Publication: J.Clin.Lab.Immunol. 7:215-217,1982

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