Last Updated: 2 dec, 2011 (Check what has been updated)
Please do not distribute any files. The software and data are provided under confidentiality between PUCL and you. Please respect this. Email JPR if you have problems (jpr@flowcyt.cyto.purdue.edu)
Please download the following files.
I suggest you play the tutorials while playing with the files. This way you can follow along with the tutorial. There are more basic tutorials at our EDUCATION page, Tutorials. They may be helpful.
PlateAnalyzer Programs - there are three files - the main file is platAn.exe, there is an INI file which records your file history, and your license file. All three files must be in the same directory. These are coded for your use only. You may use as many copies as you want for your lab use, on as many computers as you want, but they will all be coded with your name. If you want a collaborator to have a copy please send JPR an email.
Download the parameters and plate layout files and I suggest you create a directory to identify them as such.
Full Plate Examples for Drug Dose Responses
- Example plate 58 - 384 well plate with JC-1 (ZIP file unzip to use)
- Example plate 65 - 384 well plate with Redox (Zip file unzip to use)
Parameter & Plate Layout
Example drug concentration CSV file (use for plates 58 & 65)
Example PAP file for Plate 58 (simple layout)
Example PAP file for Plate 58 (advanced layout)
Drug Concentration File (CSV) for 58 and 65
Example PAP file for Plate 65 (advanced layout)
Example PAP file for Plate 65 (Very advanced layout) this layout shows how you can create an entire report in a single protocol to produce all 96 graphs.This is pretty cool!
Tutorials
Here are the general tutorials
CyTOF - a special version for the Cytof data is available
TESLA Implemenation
We will release a version for the TESLA NVIDIA graphics board soon. We are currently working with the 448 processor board, but any of them will work (2050 or 2070). This should be "blindingly" fast. It may melt your mouse!!
Programs
- PlatAn.exe (the latest version of the main program)
- PlatAn.ini (can be deleted any time but it remembers what you have done - if you have major problems and the program seems possessed, just deleted this file and start again). The main program installation is in c:/program files (x86)/PUCL/Plate Analyzer (x86 for 64 bit) and c/:program files/PUCL/Plate Analyzer (for 32bit computers). The download is to your /users/name directory (windows 7 does not allow editing files in main program directory) but the program is run from the c:/program files directory and this is where you MUST place your LIC file.
- Platan.lic (your license file which must remain with the exe) MUST BE IN THE SAME DIRECTORY AS THE PLATAN.EXE file
