Serialized Form

Package bijnum

Class bijnum.BIJException implements Serializable

Serialized Fields

info

int info

string

java.lang.String string

Class bijnum.SVDCException implements Serializable

Serialized Fields

info

int info

Package FlowJ

Class FlowJ.FlowJCanvas implements Serializable

Serialized Fields

display

java.lang.Object display

alphaField

java.awt.Label alphaField

rLabel

java.awt.Label rLabel

sLabel

java.awt.Label sLabel

posLabel

java.awt.Label posLabel

Class FlowJ.FlowJException implements Serializable

Serialized Fields

info

int info

string

java.lang.String string

Package of3d

Class of3d.OF3DFlow implements Serializable

Serialized Fields

v

float[][][][] v

computed

boolean[][][] computed

vs

Volume vs

random

java.util.Random random

Class of3d.OF3DUserInterface implements Serializable

Serialized Fields

renderTimeSeries

java.awt.Button renderTimeSeries

computeScaleFlow

java.awt.Button computeScaleFlow

computeFlow

java.awt.Button computeFlow

flatFlow

java.awt.Button flatFlow

flat2DFlow

java.awt.Button flat2DFlow

subtractAverageFlow

java.awt.Button subtractAverageFlow

computeTestFlow

java.awt.Button computeTestFlow

saveFlow

java.awt.Button saveFlow

openFlow

java.awt.Button openFlow

openTrueFlow

java.awt.Button openTrueFlow

calcPsi

java.awt.Button calcPsi

regularizationChoice

java.awt.Choice regularizationChoice

ofclassificationChoice

java.awt.Choice ofclassificationChoice

majorAxesChoice

java.awt.Choice majorAxesChoice

renderChoice

java.awt.Choice renderChoice

fractionField

java.awt.TextField fractionField

hyperdepthField

java.awt.TextField hyperdepthField

tauField

java.awt.TextField tauField

sigmasField

java.awt.TextField sigmasField

sigmatField

java.awt.TextField sigmatField

sigmawField

java.awt.TextField sigmawField

rhoField

java.awt.TextField rhoField

frameField

java.awt.TextField frameField

centerField

java.awt.TextField[] centerField

staticCheckbox

java.awt.Checkbox staticCheckbox

scintillansCheckbox

java.awt.Checkbox scintillansCheckbox

normalsCheckbox

java.awt.Checkbox normalsCheckbox

TIMESERIES

int TIMESERIES

VERSION

java.lang.String VERSION

vf

OF3DFlow vf

vft

OF3DFlow vft

Package volume

Class volume.HyperVolume implements Serializable

Serialized Fields

hv

float[][][][] hv

length

int length

Class volume.Volume implements Serializable

Serialized Fields

width

int width

Dimensions of the volume.

height

int height

Dimensions of the volume.

depth

int depth

Dimensions of the volume.

edge

int edge

aspectx

double aspectx

Anisotropy measure of the volume.

aspecty

double aspecty

Anisotropy measure of the volume.

aspectz

double aspectz

Anisotropy measure of the volume.

Class volume.VolumeFloat implements Serializable

Serialized Fields

v

float[][][] v

Class volume.VolumeInteger implements Serializable

Serialized Fields

v

int[][][] v

Class volume.VolumeIO implements Serializable

Class volume.VolumeRGB implements Serializable

Serialized Fields

b

byte[] b

The brightness of each voxel as a byte (0-225). This brightness derives from the HSB color model.

index

byte[] index

The index value for each voxel, if any.

sliceArray

java.lang.Object[] sliceArray

The slices for this volume with the actual RGB data.

Class volume.VolumeShort implements Serializable

Serialized Fields

v

short[][][] v

indexed

boolean indexed

Package VolumeJ

Class VolumeJ.VJBinaryShell implements Serializable

Serialized Fields

v

boolean[] v

During instantiation, every cell (of 8 voxels) is checked to see whether this cell contains both a true and a false thresholded voxel. If so, it is part of the binary shell of an object. If not, it is not interesting. It is used as the shell volume input to a iso-surface renderer. Also implements methods to traverse the shell.

sx

int sx

All highly factored values for cell advance algorithm.

sy

int sy

All highly factored values for cell advance algorithm.

sz

int sz

All highly factored values for cell advance algorithm.

n

int n

total

int total

ix

int ix

iy

int iy

iz

int iz

Axz

double Axz

Bxz

double Bxz

Ayz

double Ayz

Byz

double Byz

Cxzai

int Cxzai

Cxzbi

int Cxzbi

Cyzai

int Cyzai

Cyzbi

int Cyzbi

Cxzas

int Cxzas

Cxzbs

int Cxzbs

Cyzas

int Cyzas

Cyzbs

int Cyzbs

Cxzc1

double Cxzc1

Cxzc2

double Cxzc2

Cyzc1

double Cyzc1

Cyzc2

double Cyzc2

dx

double dx

dy

double dy

dz

double dz

inflater

double inflater

distanceDeltaxzi

int distanceDeltaxzi

distanceDeltayzi

int distanceDeltayzi

s

java.lang.String s

Class VolumeJ.VJSurfaceJ implements Serializable

Serialized Fields

sigmaField

java.awt.TextField sigmaField

renderSurfaceplot

java.awt.Button renderSurfaceplot

Class VolumeJ.VJThresholdedVolume implements Serializable

Serialized Fields

v

boolean[] v

Class VolumeJ.VJUserInterface implements Serializable

Serialized Fields

render

java.awt.Button render

renderCine

java.awt.Button renderCine

renderStereo

java.awt.Button renderStereo

renderStop

java.awt.Button renderStop

renderExtra

java.awt.Button renderExtra

gradientChoice

java.awt.Choice gradientChoice

classificationChoice

java.awt.Choice classificationChoice

axisChoice

java.awt.Choice axisChoice

sourceChoice

java.awt.Choice sourceChoice

indexChoice

java.awt.Choice indexChoice

mappingChoice

java.awt.Choice mappingChoice

interpolationChoice

java.awt.Choice interpolationChoice

lutChoice

java.awt.Choice lutChoice

testCheckbox

java.awt.Checkbox testCheckbox

cutoutCheckbox

java.awt.Checkbox cutoutCheckbox

traceCheckbox

java.awt.Checkbox traceCheckbox

backCheckbox

java.awt.Checkbox backCheckbox

diskCheckbox

java.awt.Checkbox diskCheckbox

rotField

java.awt.TextField[] rotField

aspectField

java.awt.TextField[] aspectField

lightField

java.awt.TextField[] lightField

cutoutField

java.awt.TextField[] cutoutField

traceField

java.awt.TextField[] traceField

cineField

java.awt.TextField cineField

cineNField

java.awt.TextField cineNField

widthField

java.awt.TextField widthField

thresholdField

java.awt.TextField thresholdField

scaleField

java.awt.TextField scaleField

classifierTextArea

java.awt.TextArea classifierTextArea

iList

int[] iList

rs

VJRenderView rs

renderer

VJRenderer renderer

v

Volume v

shader

VJShader shader

classifier

VJClassifier classifier

initializing

boolean initializing

Class VolumeJ.VJViewerCanvas implements Serializable

Serialized Fields

renderView

VJRenderViewInteractive renderView

The rendering viewer

clickTime

long clickTime

Some practical variables

mouseIsDown

boolean mouseIsDown

startMouseX

int startMouseX

startMouseY

int startMouseY