Re: Sort purity

From: Maciej Simm (simmmmer@yahoo.com)
Date: Tue Oct 30 2001 - 18:39:52 EST


Simon,
I've done no sorting personally, but I've been in a few discussions
on the topic, so here is my quackery:

the only way to test for purity of something you sorted is to run it
thru flow again.

problem 1:
your original reagent has been partially quenched in the first pass
thru the laser(s).

problem 2:
if you stain with the same marker but in a different color, the
staining will be dim(mer) because of competition for binding sites.

my suggestion: do your sorting magnetically or have at least one
other marker to verify your purity. example: magnetically sort T
cells by CD3, and verify with fluorescent alpha TCR.

maciej
--- Simon Monard <smonard@trudeauinstitute.org> wrote:
>
> Hi folks.
> Can anyone point me to a discussion of ways to estimate the purity
> of a sorted population
> of cells. This is clearly easy when you are sorting very bright
> cells from negatives
> but more problematic when sorting cells from a "shoulder". I
> remember seeing a nice
> discussion on this subject but cannot remember where. I've been
> sorting some very
> weakly positive cells from a population, these cells post sort
> overlap the negative
> cells quite a bit. My customer seems unhappy about  that.
> Thanks
>
> Simon Monard
> FACS Lab Manager
> Trudeau Institute
> Saranac Lake
> NY12983
>
> Ph 518 891 3080 X352
>


__________________________________________________
Do You Yahoo!?
Make a great connection at Yahoo! Personals.
http://personals.yahoo.com



This archive was generated by hypermail 2b29 : Sun Jan 05 2003 - 19:01:36 EST