I think your question may be a bit off. the object of using the Biotin -avidin system is to be able to label a primary antibody on the cell surface. You do not use a secondary antibody rather avidin conjugated to a fluorochrome. The theoretical increase in fluorescence that is tauted for this complex is based on the chemistry of biotin. the biotin molecule is capable of binding several (I believe 7) avidin molecules. This is what gives you the increased signal since now every biotin molecule on your primary antibody is capable of binding 7 molecules of avidin ie 7 fluorochrome molecules. This is often more molecules than are attached to the secondary antibodies used for primary detection. One should remember however, that more is not always better. Fluorescent molecules may be quenched when in close proximity to other fluorescent molecules and therefore the net result may be lower intensity signals. We have used biotinylated antibodies in three and four color analyses since this gives us the option to use the second laser to detect the avidin binding using APC. in our hands, the biotin avidin antibody staining is often at least 1 log brighter than the same antibody directly conjugated to the same fluorochrome. There are clearly experts in this society who have a better understanding of this area than I so you will want to assess all answers to this question. Charles A. Kuszynski, Ph.D. Assistant Professor/Director University of Nebraska Medical Center 986495 Nebraska Medical Center Cell Analysis Facility, WH 3024 Omaha, NE 68198-6495 402.559.6267 voice 402.559.4077 fax ckuszyns@unmc.edu
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