| Title | Contributor / Developer |
| Catalog of Free Flow Cytometry Software | PUCL |
| AFlexSet - Computer program for determining fluorescence resonance energy transfer efficiency from flow cytometric data on a cell-by-cell basis. | Attila Jenei, László Mátyus, Gergely Szentesi |
| facSimile: Developing a Virtual Flow Cytometer | Geoffrey Osborne |
| Flow Explorer (Commercial) | Ron Hoebe |
| BD Java Fluorescence Spectrum Viewer | Joe Trotter |
| WinMDI Software | Joe Trotter |
| FCS Assistant (Commercial) | Ray Hicks |
| FCS Press (Commercial) | Ray Hicks |
| FlowJo Demo (Commercial) | Tree Star, Inc. |
| FCS Express (Commercial) | Phoenix Flow Systems |
| LDATA & LLDATA | Gérald Grégori - PUCL |
| MultiCycle AV (Commercial) | Phoenix Flow Systems |
| MultiTime (Commercial) | Phoenix Flow Systems |
