Re: Clone Cyt-How many drops

From: Dr S Sreckovic (Sasa.Sreckovic@bristol.ac.uk)
Date: Fri Feb 11 2000 - 11:35:02 EST


Geoff,

To start from the end.

> A friend of mine with a new Vantage SE uses a 1.5 drop envelope I
> dont see the logic in this as half the time it sorts 2 drops and half
> the time it sorts 1!Which is best?

When Vantage sorts on 1.5 drops it does not randomly sort 1 or 2 drops. 
Logic is that it virtually divides drop (i.e. drop time) in 10 equal 
sections. If it's estimated that target cell is going to end up in 
first 3 sections, that drop and previous one is sorted. Accordingly, if 
it's in the last 3 sectors following drop goes instead and if it's in 
central 4 sections only 1 drop is sorted. I use 1.5 drops in most of 
the cases, gives me good purities and keeps aborts less than 10% on 1 
cell/6 drops, meaning 5000 cells/sec. on 30KHz, 11PSI which is quite 
fast for "low speed" with acceptable recovery. Of course recovery is 
not an issue for CloneCyt and you should go for 3 drops always.

> I'm sure lots of people reading this with
> ageing Vantages get some varation in drop delay it seems to me this
> is being compensated for by a three drop envlope

I had honour to have a lesson from Mr "Vantage Designer" Mike Hoffman 
and if I understood him right, difference between what you calculate 
and real drop delay comes from the fact that dead time (>5µs, 
adjustable) and sort decision time (0.5µs pulse) are not included in 
simple calculation that takes break-off distance (delay time) as a 
whole, as if machine starts "delaying" immediately from interception 
point. There is no reason that by ageing Vantage would change this 
difference, but any major fluidics repairs and/or electronics boards 
replacement could affect this as well as playing with dead time or 
using pulse processing. My system has -0.3 offset on 30KHz which could 
be explained by ~10µs excluded from 1/30000 sec. drop = 33µs. Old 
Vantages have bigger offsets because they have longer dead time and 
much longer processing time if they were upgraded with SEM.

Just for clarification,
Sasha.

••••••••••••
Dr Sasha Sreckovic
Dept Path & Micro
University of Bristol
University Walk
Bristol, BS8 1TD, UK
Sasa.Sreckovic@bristol.ac.uk
+44-(0)117-928-8606
••••••••••••

----------
>From: "geoff.morgan" <geoff.morgan@bbsrc.ac.uk>
>To: Cytometry Mailing List <cytometry@flowcyt.cyto.purdue.edu>
>Subject: Clone Cyt-How many drops
>Date: Thu, Feb 10, 2000, 1:09 pm
>

>
> Dear flowers, Mike Evans's logic seems right if the machine is set up 
right > a single drop envelope with one cell in it should work.
> Two points     1.In the Clone Cyt user guide it only says optimise 
the > sorter for sorting. On page 24 it shows the sort control window 
with 3 > deflected drops and counter Sort Mode.  2.In the Vantage user 
guide when > in Counter mode the 3 drop envelope(shown in the picture) 
is extended to > 4 "to achive high count accuracy" From my own 
experience a three drop > envelope gives better purity over a wider 
range of Dop Delays   than a > 2 or 1 drop delay.With a one drop 
envelope drop delay must be spot on, > any drift and purity is lost.I'm 
sure lots of people reading this with > ageing Vantages get some 
varation in drop delay it seems to me this > is being compensated for 
by a three drop envlope.What do other people > use? A friend of mine 
with a new Vantage SE uses a 1.5 drop envelope I > dont see the logic 
in this as half the time it sorts 2 drops and half > the time it sorts 
1!Which is best? >
> > Geoff Morgan   Babraham, Cambridge UK
> > m



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