Re: A DNA analysis question

From: Alice L. Givan (Alice.L.Givan@Dartmouth.EDU)
Date: Tue Dec 21 1999 - 17:50:19 EST


My two cents:
We did a comparison of integral vs peak measurements and integral vs width
measurements --- to discriminate G2M cells from doublets on a FACSCalibur.
I believe this instrument has a 20 micron beam width -- and  the integral
vs width comparison showed excellent discrimination between G2M cells and
doublets,  but the integral vs peak discrimination was poor (presumably
because,  if the doublet is entirely in the laser beam at some point
in time,  its peak height will be identical to that of a G2M cell when
it is entirely in the laser beam).  For comparison,   we also looked
at integral vs peak measurements on a Coulter bench top instrument ---
and got good discrimination of G2M cells from doublets.  The Coulter
instrument has,  I believe, a beam width of 10 microns  and this makes,
as Nick Terry says,  a big difference in the value of the peak value for
aggregate discrimination.  Because the Coulter instrument that we were
using did not display a width parameter,  we had no way of comparing
integral vs peak with integral vs width discrimination on this instrument.


Alice

Alice L. Givan
Englert Cell Analysis Laboratory
of the Norris Cotton Cancer Center
Dartmouth Medical School
Lebanon, New Hampshire NH 03756
tel 603-650-7661
fax 603-650-6130
givan@dartmouth.edu



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