volume
Class Diffusion3D

java.lang.Object
  |
  +--volume.Diffusion3D

public class Diffusion3D

extends java.lang.Object

This is a class that implements nonlinear diffusion in 2D, 3D and 4D. Copyright (c) 1999-2002, Michael Abramoff. All rights reserved.

Field Summary

protected int	depth
protected HyperVolume	hv
protected static int	iterations
protected static double	k
protected static double	lambda
protected boolean	scaleSpaceContrast
protected VolumeFloat	v

Constructor Summary

Diffusion3D()

Method Summary

void	compute3D()
void	compute4D()
protected static double	dA(HyperVolume v, int x, int y, int z, int t)
protected static double	dB(HyperVolume v, int x, int y, int z, int t)
protected static double	dD(HyperVolume v, int x, int y, int z, int t)
protected static double	dD(VolumeFloat v, int x, int y, int z)
protected static double	dE(HyperVolume v, int x, int y, int z, int t)
protected static double	dE(VolumeFloat v, int x, int y, int z)
protected static double	dN(HyperVolume v, int x, int y, int z, int t)
protected static double	dN(VolumeFloat v, int x, int y, int z)
protected static double	dS(HyperVolume v, int x, int y, int z, int t)
protected static double	dS(VolumeFloat v, int x, int y, int z)
protected static double	dU(HyperVolume v, int x, int y, int z, int t)
protected static double	dU(VolumeFloat v, int x, int y, int z)
protected static double	dW(HyperVolume v, int x, int y, int z, int t)
protected static double	dW(VolumeFloat v, int x, int y, int z)
protected static double	g(double grad, double k)
protected static double	gScaleSpace(double a, double k)
void	intoStack(ij.ImageStack is)
boolean	params(ij.ImagePlus imp, VolumeFloat v)
boolean	params4D(ij.ImagePlus imp)

Methods inherited from class java.lang.Object

, clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

iterations

protected static int iterations

k

protected static double k

lambda

protected static double lambda

depth

protected int depth

scaleSpaceContrast

protected boolean scaleSpaceContrast

v

protected VolumeFloat v

hv

protected HyperVolume hv

Constructor Detail

Diffusion3D

public Diffusion3D()

Method Detail

params

public boolean params(ij.ImagePlus imp,
                      VolumeFloat v)

compute3D

public void compute3D()

params4D

public boolean params4D(ij.ImagePlus imp)

compute4D

public void compute4D()

intoStack

public void intoStack(ij.ImageStack is)

gScaleSpace

protected static double gScaleSpace(double a,
                                    double k)

g

protected static double g(double grad,
                          double k)

dN

protected static double dN(VolumeFloat v,
                           int x,
                           int y,
                           int z)

dS

protected static double dS(VolumeFloat v,
                           int x,
                           int y,
                           int z)

dE

protected static double dE(VolumeFloat v,
                           int x,
                           int y,
                           int z)

dW

protected static double dW(VolumeFloat v,
                           int x,
                           int y,
                           int z)

dU

protected static double dU(VolumeFloat v,
                           int x,
                           int y,
                           int z)

dD

protected static double dD(VolumeFloat v,
                           int x,
                           int y,
                           int z)

dN

protected static double dN(HyperVolume v,
                           int x,
                           int y,
                           int z,
                           int t)

dS

protected static double dS(HyperVolume v,
                           int x,
                           int y,
                           int z,
                           int t)

dE

protected static double dE(HyperVolume v,
                           int x,
                           int y,
                           int z,
                           int t)

dW

protected static double dW(HyperVolume v,
                           int x,
                           int y,
                           int z,
                           int t)

dU

protected static double dU(HyperVolume v,
                           int x,
                           int y,
                           int z,
                           int t)

dD

protected static double dD(HyperVolume v,
                           int x,
                           int y,
                           int z,
                           int t)

dB

protected static double dB(HyperVolume v,
                           int x,
                           int y,
                           int z,
                           int t)

dA

protected static double dA(HyperVolume v,
                           int x,
                           int y,
                           int z,
                           int t)