Darlene, Re your FACStar+ 4-color FITC/PE/Tricolor/APC setup: 1. We also had a few initial problems with similar setups partly caused by inaccurate assembly of the crossed mirrors at the FL3-1/FL3-2 junction. Having played with re-assembly of that over several hours, I can tell you *don't* do it unless you really must. You should be able to get simultaneous alignment of both sides just by adjusting the iris positions on each side. Get the Tricolor side adjusted first. 2. We use B_D calibrite and Flow Cytometry Standards PE.Cy5 beads for setting compensation in that kind of setup. Being able to see the PE.Cy5 bead fluorescence will also give you a check on possible failure of your tricolor staining. There is also a quirk to look out for when setting the FL2/FL3-1 compensation; if the pulse widths are not well matched, you can't accurately cancel out the spillover. Watch the pulse display as well as the dot plot while doing the setting. If the compensated pulse gets hollow in the middle with a peak at either or both sides, adjust the iris opening. 3. I hope you have realized that the HeNe will excite the Cy5 component of the Tricolor and that that signal will come up in the APC channel almost as brightly as it does in the Tricolor channel. Hope some of that helps. Frank. \ / < The Flow Systems Laboratory Frank Battye, \__/ <<<<< The Walter & Eliza Hall Institute Dora Kaminaris,----------!!<<<<<<<< Victoria 3050, AUSTRALIA Viki Lapatis and /!!\ <<<<< ph: 61_3_9345 2540 fax: 61_3_9347 0852 Jennie Parker o !! \ < in:: "facs_copy@wehi.edu.au"
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