GFP and PI Fixation....Again!

From: Kroeger, Jodi (kroegerJL@Moffitt.usf.edu)
Date: Wed Feb 25 1998 - 11:44:29 EST


Dear Colleagues:

I realize this is a topic previously discussed thousands of times, and I
have attempted to search through the Internet archives to address this
question for a researcher in my core lab.  However, there are so many
messages and so little time that I would be sitting for hours to find
the specific reply to this question.  So...I apologize in advance for
the repetitive nature of this request for help.  Any response will be
greatly appreciated by me and many users of my facility attempting to do
GFP and PI staining.  Please reply to me and I will pass the info on to
others.


Objective:  Analysis of GFP and PI in NIH 3T3 fibroblast cells.

Current Protocol:  Removal of adherent cells with 1X PBS/0.5M EDTA and
scraping.  Fixation with 1% paraformaldehyde for 10 minutes on ice.
Cells stained in PBST at 50ug/ml PI and 100ug/ml RNAse A and kept over
the weekend until analysis.

Obstacle:  Cells are clumping, which renders a clean cell cycle profile
of GFP-positive cells impossible to acquire.

Question(s):  What can be done to prevent the clumping...is it related
to the removal of the adherent cells?  Are the concentrations of the
reagents and times of incubation sufficient?


Thanks Again,

Jodi L. Kroeger for Tammy L. Bowman, Ph.D
H. Lee Moffitt Cancer Center and Research Institute
Tampa Florida


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