Apoptosis and cell cycle analysis

From: Ulrika K Eriksson (ulrikae@biotech.kth.se)
Date: Fri Sep 06 2002 - 08:39:00 EST


Hi!

I'm a newborn in the flow cytometry context and have a few questions
I haven't been able to find answers to inspite of a massive litt
search.
The aim of my diploma work is to do apoptosis (with Annexin V-FITC
and PI) and cell cycle analysis (with PI) on animal cells in batch
culture using a partec flow cytometer without a sorter.

Concerning cell cycle analysis:
-After fixtion in EtOH the cells should be treated with RNase. Does
the RNase      have to be DNase free?
-Is it necessary to buy unstained trout red blood cells (TRBC) to use
as a control for the method/flow cytometer or are TRBC only used in
clinical applications?
-Would a certain channel number be recommended for cell cycle
analysis (e.g 255,512,1023)?

Concerning apoptosis studies:
-To set up the flow cytometer and compensate for crosstalk I'm going
to use apoptosis-induced cells stained with FITC only and
apoptosis-induced cells stained with PI only and run them separetly
on the flow cytometer. I was recommended to use butyric acid (5mM) as
an apoptosis inducer. Does anybody know an approximate incubation
time to achieve an "apoptosis" maximum (i.e. where the signal will be
the strongest)?

Many thanks!

Best regards,

Ulrika Eriksson
Division of Bioprocesses
Institution of Biotechnology
Royal Institute of Technology
Stockholm, Sweden
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