I would like to introduce myself and CRI to this group using as an excuse this query about overlapping dyes. If the question relates to microscopy as opposed to flow cytometry (which I tend to doubt), then my answer will have some relevance. Briefly, my company makes tunable spectral filters that allow one to take a number of images at different wavelengths (the bandpass can be as narrow as 5 nm, and the bandpass can be tuned with 1-nm precision; the spectral range is typically from 450 or so to 720 nm for our visible-range filters). With the spectral information, it is possible to unmix signals from dyes that overlap substantially (peak to peak distances of 5 to 10 nm or less), with overlap in the rest of the spectral range as well. We have used it to separate greenish autofluorescence from Cy2 green dye emissions very sucessfully. In short, for microscopy applications using the dyes Elena lists, we should be able to unmix the signals readily without change in labeling technique. I would be happy to discuss this topic more online or off. Thanks, Richard Richard Levenson, MD Research Director, Biomedical Systems CRI, Inc. 35-B Cabot Rd. Woburn, MA 01801 781-935-9099 x 204 781-935-3388 fax rlevenson@cri-inc.com www.cri-inc.com ----- Original Message ----- From: "Elena Soriano" <E.Soriano@iam.boku.ac.at> To: cyto-inbox Sent: Monday, May 28, 2001 7:45 AM Subject: to stain RNA under GFP presence I please for an advice about what fluorochromes could I use to stain RNA in presence of GFP. For RNA I allways used pyronyne-Y, but in this case its fluorescence is strongly overlapped by GFP. I have the same trouble with FITC for total protein content. Does someone knows what alternatives could I have and where could I purchase them? Thank you. Elena. ----------------------------------------- Elena Soriano c/o Institut für Angewandte Mikrobiologie Univ.f.Bodenkultur Wien Tel: +43 1 36006 6241 Fax: +43 1 36 97 615 http://www.boku.ac.at/iam
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